Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTCGGGGGGAAGGGGCGAGC
..((.(((((((((((((((((&)))))))...)))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135597
GeneSymbolCCDC88A
Binding site194,218
Score0.923
Seed0
Au0.294
Energy-26.1
Binding len24
Me-9.076
Phylopstem0.80134328
Phylopflank1.3229970237499995
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end8
Position5UTR
2D Structure