Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCTAAGAACAGCCACAAGAAGGGGGCCAAGTT
.((((((((((((((((((...&.))).)).))))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047419222
GeneSymbolBRD2
Binding site2144,2177
Score1.0
Seed1
Au0.412
Energy-24.4
Binding len23
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure