Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCTCAGTACTGGCCAGAGGAAGGGATGCTAC
...((((((((((((((((((.&))))))...............)))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135648
GeneSymbolPTPRK
Binding site4104,4139
Score0.923
Seed0
Au0.441
Energy-22.1
Binding len35
Me-6.515
Phylopstem3.710825429411764
Phylopflank4.2489993925
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure