Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCTGGAAAGGAGGGGGTA
.(((..(((((((((((((.((&)))))).)))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135648
GeneSymbolPTPRK
Binding site3341,3363
Score0.846
Seed0
Au0.574
Energy-21.5
Binding len22
Me-9.813
Phylopstem5.383365928571428
Phylopflank5.23425094625
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure