Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTCAGAAAAAACTGGCCATGCAGAAGTCGTCCGAGTGGTGTACCAGCCAGA
..((((((((((((((((((((&)))))))))))).....)).............................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135671
GeneSymbolMSRA
Binding site573,628
Score0.872
Seed1
Au0.471
Energy-21.8
Binding len55
Me-4.957
Phylopstem3.8120987370370365
Phylopflank4.64064054125
Longest consecutive pairings12
Position of longest consecutive pairings43
Pairings in 3prime end8
PositionCDS
2D Structure