Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCAGGGAAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGA
..((((((((((((((((.((.&))))))))))..............................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135685
GeneSymbolLTK
Binding site2505,2554
Score0.923
Seed1
Au0.382
Energy-24.1
Binding len49
Me-4.957
Phylopstem0.24251921891304354
Phylopflank-0.05845082449999996
Longest consecutive pairings10
Position of longest consecutive pairings39
Pairings in 3prime end6
Position3UTR
2D Structure