Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGAACTGCGCTGCGGC
(((((((.((((((.(.....&).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047419246
GeneSymbolPRDM1
Binding site2371,2387
Score1.0
Seed1
Au0.353
Energy-18.3
Binding len16
Me-6.987
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure