Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGCGGGGCTCCGCACACCTCGTGGCCCTCAAGTGC
(((((((((((((((((((...&))))))))).)))))).....................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135740
GeneSymbolPNCK
Binding site162,204
Score0.821
Seed1
Au0.309
Energy-23.6
Binding len42
Me-3.938
Phylopstem-0.1046823341463414
Phylopflank-0.3358455537499999
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end5
PositionCDS
2D Structure