Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGCTGGAGTGCAGTA
.(((((((((..(((((((.((&)))))))))..))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135745
GeneSymbolALS2
Binding site1819,1841
Score0.846
Seed1
Au0.426
Energy-23.8
Binding len22
Me-9.965
Phylopstem5.118148799999999
Phylopflank3.979396091250001
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure