Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCCGTGACCACTGCTGTCCAGGAACTGCTGCGT
.(((((((((((((((((((.&)))))))))))))....................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047419259
GeneSymbolSKIV2L
Binding site2888,2928
Score0.846
Seed1
Au0.324
Energy-25.7
Binding len40
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings27
Pairings in 3prime end7
PositionCDS
2D Structure