Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAAGGGTGAGGAGGCCAGTGG
(((((((((((((((((((...&))))).))..)))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135769
GeneSymbolPVR
Binding site2918,2942
Score0.846
Seed1
Au0.397
Energy-24.2
Binding len24
Me-3.938
Phylopstem-0.6738515652173915
Phylopflank-0.42131779874999997
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure