Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGAGGTTCAGAAGGTCCAGCTCACTGGAGAGCCAGTGC
((((((((((((((((((....&.)))))))))..............))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135770
GeneSymbolPVR
Binding site632,671
Score0.846
Seed1
Au0.353
Energy-23.0
Binding len34
Me-3.938
Phylopstem0.4414852812499999
Phylopflank0.06918946125000011
Longest consecutive pairings9
Position of longest consecutive pairings24
Pairings in 3prime end4
PositionCDS
2D Structure