Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCAAAGAGAGGGAGTTG
....(((((((((((.(((((.&)))))..))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135806
GeneSymbolSYT1
Binding site3738,3758
Score0.846
Seed0
Au0.632
Energy-19.8
Binding len20
Me-9.78
Phylopstem1.4902942333333333
Phylopflank0.8207999562499999
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure