Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCTGCGGCCTTGTGTGCTTGTTGGCCTGCTTTGTGATGTGGAAACATAGGTA
(((((((((((((((((((((.&))))))))...))))))))).............................)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001135823
GeneSymbolSSPN
Binding site525,579
Score0.923
Seed1
Au0.529
Energy-18.6
Binding len54
Me-3.938
Phylopstem3.69190967735849
Phylopflank2.53531788125
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end7
PositionCDS
2D Structure