Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATGTGGGTGTCAGGA
.((((((((...(((((((...&)))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001135823
GeneSymbolSSPN
Binding site587,605
Score0.923
Seed1
Au0.441
Energy-18.0
Binding len18
Me-11.207
Phylopstem3.2829045000000003
Phylopflank3.20369988375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure