Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGCATATGCCATTGTCCTTCCTCCTGGGAAGGAGTGCGGTGT
((((((((((((((((((..((&.))..))))))))))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135924
GeneSymbolVWDE
Binding site4750,4796
Score0.846
Seed1
Au0.544
Energy-27.6
Binding len25
Me-3.938
Phylopstem2.854052894736842
Phylopflank3.658091338750001
Longest consecutive pairings13
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure