Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGTGCAACGGCTACTGCAAC
((((((..((.((((((.(((&)))...)))))).))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047419282
GeneSymbolTNFAIP3
Binding site2509,2533
Score1.0
Seed0
Au0.544
Energy-22.0
Binding len24
Me-10.62
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure