Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGGGACTATGGGGAGGAGCTGGTC
.((((((((((((((.(((...&.)))..)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135947
GeneSymbolURM1
Binding site2372,2397
Score1.0
Seed1
Au0.412
Energy-23.1
Binding len21
Me-4.026
Phylopstem0.2759041142857143
Phylopflank0.03198434624999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure