Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCCTAGAAAGGATGATTCTAACAACCCCCAGATGT
((((((.(((((((((((((..&))))).))))))))...............)))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135956
GeneSymbolTRPC4
Binding site5130,5167
Score0.923
Seed0
Au0.574
Energy-20.6
Binding len37
Me-5.481
Phylopstem1.6398264142857144
Phylopflank1.6085500274999998
Longest consecutive pairings8
Position of longest consecutive pairings23
Pairings in 3prime end6
Position3UTR
2D Structure