Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTGTAACTGCCT
....((((((((((((((....&))))))))))..)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001135957
GeneSymbolTRPC4
Binding site4354,4371
Score0.846
Seed0
Au0.618
Energy-18.5
Binding len17
Me-9.547
Phylopstem0.7727402
Phylopflank0.15485625124999994
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure