Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCTGGTGGTTCAGGAGCCGC
...((((((((..(((((((((&)))))))....))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001135958
GeneSymbolTRPC4
Binding site2146,2171
Score0.846
Seed0
Au0.485
Energy-23.2
Binding len25
Me-11.15
Phylopstem0.33420688461538456
Phylopflank0.061978183750000033
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure