Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGGGTTGGTGCCAGA
..(((((((.((((.(((....&))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001136004
GeneSymbolMICAL3
Binding site1646,1662
Score1.0
Seed1
Au0.456
Energy-18.8
Binding len16
Me-6.935
Phylopstem-0.08761402857142857
Phylopflank0.7983809690000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure