Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGGTCACTGTGGCAAGAGGGGGCCAGC
..(((((((((((((((((...&))))))..............))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001136004
GeneSymbolMICAL3
Binding site3944,3976
Score0.846
Seed1
Au0.397
Energy-26.5
Binding len32
Me-4.957
Phylopstem0.08996267419354838
Phylopflank-0.06008685999999999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure