Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTCAGCCTGGTGAACCACACAGGCCAGC
..((((((((...(((((((((&)))))))))...))...........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001136010
GeneSymbolFXYD3
Binding site207,239
Score0.846
Seed1
Au0.368
Energy-21.7
Binding len32
Me-12.418
Phylopstem-0.05000000000000001
Phylopflank0.525942565
Longest consecutive pairings9
Position of longest consecutive pairings23
Pairings in 3prime end8
Position5UTR
2D Structure