Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCAGAGTTTCAGGTTTCTGCCTGTGATCTGCAAAGAGGAGCCC
....(((((((((((((((((.&))))))))).............................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001136022
GeneSymbolNFATC4
Binding site2362,2409
Score1.0
Seed0
Au0.441
Energy-27.5
Binding len47
Me-9.547
Phylopstem2.66526404347826
Phylopflank2.0962439199999996
Longest consecutive pairings9
Position of longest consecutive pairings38
Pairings in 3prime end7
PositionCDS
2D Structure