Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCAGAACATAGGAGAACAGGGCTACTCCTCCACAAACTCCAGTGA
((((((((((((((((((.((.&)))))))))...)))))........................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001136029
GeneSymbolDEPDC5
Binding site3493,3541
Score0.923
Seed1
Au0.441
Energy-24.6
Binding len48
Me-3.938
Phylopstem1.5341838622222226
Phylopflank2.1716733374999997
Longest consecutive pairings9
Position of longest consecutive pairings39
Pairings in 3prime end6
PositionCDS
2D Structure