Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACGTGTATGCGGGC
..((.((((((.(((((((...&))))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001136053
GeneSymbolTPRA1
Binding site1023,1040
Score0.846
Seed0
Au0.397
Energy-19.4
Binding len17
Me-12.423
Phylopstem-0.6425716285714287
Phylopflank-0.294085531
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure