Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTGCCCAGAGTTGAAGGAGTCTTTATATTTCTGATAGAAGACAGTGG
((((((((((((((((((((.(&).))))))))....))))))).....................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001136112
GeneSymbolCASP5
Binding site40,88
Score0.923
Seed1
Au0.676
Energy-25.1
Binding len48
Me-3.938
Phylopstem-0.12731564888888894
Phylopflank0.49946014153125007
Longest consecutive pairings8
Position of longest consecutive pairings38
Pairings in 3prime end7
PositionCDS
2D Structure