Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACTTTGAACATGCCAGA
..(((((((.(((.((((....&)))).)))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001136138
GeneSymbolRPS6KC1
Binding site3162,3181
Score0.846
Seed1
Au0.559
Energy-17.4
Binding len19
Me-7.056
Phylopstem2.6255490428571426
Phylopflank3.9279071862499997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure