Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTAGCTAATTGTGCCAGGG
.(((((((((............&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001136138
GeneSymbolRPS6KC1
Binding site3505,3525
Score1.0
Seed1
Au0.662
Energy-16.4
Binding len11
Me-13.079
Phylopstem1.2244406333333333
Phylopflank0.576911475
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure