Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGGACACCATTAGCAGGGGCTCAGATGA
(((((((((((((((((((...&))))))))..........)))))).))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001136138
GeneSymbolRPS6KC1
Binding site2093,2125
Score0.923
Seed1
Au0.574
Energy-21.0
Binding len32
Me-3.938
Phylopstem2.264877170967742
Phylopflank2.824695225
Longest consecutive pairings8
Position of longest consecutive pairings24
Pairings in 3prime end5
PositionCDS
2D Structure