Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TACCAGGTGGCCAGGTG
(((((((.(((...(((.....&)))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001136153
GeneSymbolATF6B
Binding site2181,2198
Score0.846
Seed1
Au0.412
Energy-16.6
Binding len17
Me-11.744
Phylopstem2.2756461428571426
Phylopflank1.4412049112500003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure