Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTACAAATGCCAGA
..(((((((....(((((((..&))))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001136193
GeneSymbolFASTKD2
Binding site1596,1612
Score0.846
Seed1
Au0.618
Energy-17.4
Binding len16
Me-13.66
Phylopstem-0.29285285714285714
Phylopflank1.5621119275
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure