Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCTCAAGATTGTTTTGTCAGGAGGGATCCATCAAGCCTTGTGC
(((.((((((((((((((((((&))))))...............)))))))))........)))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001136238
GeneSymbolTMPPE
Binding site2579,2626
Score0.923
Seed0
Au0.5
Energy-21.4
Binding len47
Me-6.97
Phylopstem3.8993029024390236
Phylopflank3.5948117454999986
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure