Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACTGTATGCTAT
...(((((((((..((((((..&))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001136258
GeneSymbolSGMS2
Binding site5728,5744
Score1.0
Seed0
Au0.765
Energy-16.9
Binding len16
Me-8.661
Phylopstem1.0271099
Phylopflank1.8141931025000004
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure