Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGCCGGGGAGGGGCTC
....(((((((((((((.(((.&))).))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001136263
GeneSymbolC2CD4C
Binding site1548,1566
Score0.923
Seed0
Au0.265
Energy-26.1
Binding len18
Me-9.547
Phylopstem-0.3537028846153846
Phylopflank-0.6534539549999998
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure