Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGAGCTTGGGGTGCTCTGCCAACCCCCAGGAAGGAGCCGC
...(((((((((((((((....&.))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001136265
GeneSymbolIFFO2
Binding site2379,2421
Score0.846
Seed0
Au0.368
Energy-29.6
Binding len17
Me-6.515
Phylopstem0.6236218
Phylopflank0.42507784725
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure