Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGTGAAGGAGCGGA
...(.(((((((((((((....&)))))..)))))))).).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047419471
GeneSymbolSYNJ2
Binding site2170,2188
Score0.846
Seed0
Au0.426
Energy-21.4
Binding len18
Me-10.634
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings3
Pairings in 3prime end4
PositionCDS
2D Structure