Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGGGTGTCAGGG
.((((((((....(((((....&)))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001136271
GeneSymbolNKX2-6
Binding site1040,1056
Score0.846
Seed1
Au0.309
Energy-18.5
Binding len16
Me-12.497
Phylopstem3.1633867625
Phylopflank3.6384163225
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure