Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCTGGAGCCAGG
..((((((((.....(((((((&))))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001136275
GeneSymbolAKIRIN1
Binding site1374,1391
Score0.846
Seed1
Au0.456
Energy-25.9
Binding len17
Me-14.01
Phylopstem1.095620775
Phylopflank1.140829552
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure