Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGAGCTCGGCTGAACCAGCCTTTAGTGC
((((((((((.(((((((((((&)))))))))))...)).......))))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001136472
GeneSymbolLITAF
Binding site932,967
Score0.846
Seed1
Au0.471
Energy-24.3
Binding len35
Me-6.762
Phylopstem-0.10635671818181817
Phylopflank-0.23030784124999998
Longest consecutive pairings11
Position of longest consecutive pairings24
Pairings in 3prime end8
Position3UTR
2D Structure