Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACAAGCGTTTGTAGGACTCAGCCAGACGTGGAGGGAGCCGGG
..(((((((((((((((.(.((&.))).))))).....)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001136473
GeneSymbolLITAF
Binding site638,682
Score1.0
Seed1
Au0.397
Energy-24.8
Binding len26
Me-4.957
Phylopstem0.29129947000000006
Phylopflank0.0026950367499999975
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure