Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGAGCTCGGCTGAACCAGCCTTTAGTGC
((((((((((.(((((((((((&)))))))))))...)).......))))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001136473
GeneSymbolLITAF
Binding site1061,1096
Score0.923
Seed1
Au0.471
Energy-24.3
Binding len35
Me-6.762
Phylopstem0.06501318181818179
Phylopflank-0.11677506750000002
Longest consecutive pairings11
Position of longest consecutive pairings24
Pairings in 3prime end8
Position3UTR
2D Structure