Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGTGGCCCCTGAGCCGTGTGA
(((((((((((..((((((((.&)))))))).)).....)))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001136495
GeneSymbolC1orf198
Binding site1931,1958
Score0.846
Seed1
Au0.324
Energy-25.6
Binding len27
Me-8.574
Phylopstem-0.11178761764705876
Phylopflank0.04987578375000001
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end7
Position3UTR
2D Structure