Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGAGACTGCAAGGCATAATTTGATAATTAATATAATGTCTGCAGA
((((((((((((((..(((((&)))))...)))))))..........................).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346717
GeneSymbolSGCE
Binding site446,496
Score0.846
Seed1
Au0.647
Energy-17.6
Binding len50
Me-4.906
Phylopstem0.9010421830219512
Phylopflank2.9501935612987498
Longest consecutive pairings7
Position of longest consecutive pairings35
Pairings in 3prime end6
PositionCDS
2D Structure