Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001136501
GeneSymbolZNF844
Binding site2888,2911
Score0.846
Seed1
Au0.397
Energy-26.9
Binding len23
Me-10.109
Phylopstem-0.13598934363636364
Phylopflank-0.4489350395
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure