Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAAGCAGGA
....(((((((((((((((((&)))))).......................))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001136501
GeneSymbolZNF844
Binding site5238,5282
Score0.846
Seed0
Au0.397
Energy-24.7
Binding len44
Me-9.547
Phylopstem-0.09264865116279065
Phylopflank-0.043906087499999996
Longest consecutive pairings6
Position of longest consecutive pairings38
Pairings in 3prime end8
Position3UTR
2D Structure