Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTATATTGCAAAGTCAGGG
.((((((...(((((((((...&)))))))))....)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047419504
GeneSymbolUBE3D
Binding site1710,1730
Score0.846
Seed1
Au0.662
Energy-16.1
Binding len20
Me-8.406
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure