Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GGGAACCTCAGTAATAATGG
((((((((((...(((.(.(.&).).)))..)))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_001136543
GeneSymbolLYSMD1
Binding site1647,1667
Score0.846
Seed1
Au0.603
Energy-15.4
Binding len20
Me-11.398
Phylopstem-0.030227469999999985
Phylopflank1.9544964412499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure