Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGTGGCCCGATTAACATGGAGGAGACCAGG
..(((((((((((((((((...&))))))...............))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001136562
GeneSymbolPALM2AKAP2
Binding site2198,2232
Score1.0
Seed1
Au0.441
Energy-23.9
Binding len34
Me-4.957
Phylopstem1.8318260242424245
Phylopflank3.4708696550000004
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure